BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027C05SP1|AL428692
(917 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1680 1818 0.0
>3x_Contig1680
Length = 12597
Score = 1818 bits (917), Expect = 0.0
Identities = 917/917 (100%)
Strand = Plus / Plus
Query: 1 acgcttcttgtgcggatttgtattgtcctattcttttctccactataatatccacactaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2061 acgcttcttgtgcggatttgtattgtcctattcttttctccactataatatccacactaa 2120
Query: 61 aaattttaactttctaattggtaattatcaagttcttttaatgatgtttccaagcctact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2121 aaattttaactttctaattggtaattatcaagttcttttaatgatgtttccaagcctact 2180
Query: 121 attctttcaactaatgacagttctcttaattatcgatgatggtatgatatagacataaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2181 attctttcaactaatgacagttctcttaattatcgatgatggtatgatatagacataaag 2240
Query: 181 gatgatataattatgatatacatatataaaatttgatataatataaactaaatatgaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2241 gatgatataattatgatatacatatataaaatttgatataatataaactaaatatgaaat 2300
Query: 241 cacatattccatttataggtgcttgatgtttcatttattctcagcgtagaaaaagtttac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2301 cacatattccatttataggtgcttgatgtttcatttattctcagcgtagaaaaagtttac 2360
Query: 301 cgcaactggagtcaagttgaacaattcagcataatgctggaaaccggtaccaggtttctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2361 cgcaactggagtcaagttgaacaattcagcataatgctggaaaccggtaccaggtttctt 2420
Query: 361 gaacccccaattgggccgatcactgacagattccggttttttatctggggattgctgagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2421 gaacccccaattgggccgatcactgacagattccggttttttatctggggattgctgagc 2480
Query: 421 aagaatccaaacgtagcggtgtggaccggtgccctttggtggagctggtccgacgtacgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2481 aagaatccaaacgtagcggtgtggaccggtgccctttggtggagctggtccgacgtacgg 2540
Query: 481 taattgcacatcgcctgcctttaagtccagcgacattggagtatctgggtccagacttag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2541 taattgcacatcgcctgcctttaagtccagcgacattggagtatctgggtccagacttag 2600
Query: 541 cttgatgttagtctctaaataatgacagtactcagaccatttgttatcggaattagatgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2601 cttgatgttagtctctaaataatgacagtactcagaccatttgttatcggaattagatgg 2660
Query: 601 tgcatctggatcagtcaaacacaaggaatacagagcgtctgtatctagctgagcatcgtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2661 tgcatctggatcagtcaaacacaaggaatacagagcgtctgtatctagctgagcatcgtt 2720
Query: 661 tccaccagcgactttaatttccggtttctcctgagtaccgtcgatagataaagtgttacc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2721 tccaccagcgactttaatttccggtttctcctgagtaccgtcgatagataaagtgttacc 2780
Query: 721 caatgcgacaggatgcttagaagcgtattcgattaccaaactggtggaacccttattaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2781 caatgcgacaggatgcttagaagcgtattcgattaccaaactggtggaacccttattaga 2840
Query: 781 gaaatctggaagtactttagagatcactccatgagaagtaagggaatctttgatagcttt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2841 gaaatctggaagtactttagagatcactccatgagaagtaagggaatctttgatagcttt 2900
Query: 841 ggcagaattaattgaagcaaacattgttgaggaatgtgcagaggatattaaaaatcgtac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2901 ggcagaattaattgaagcaaacattgttgaggaatgtgcagaggatattaaaaatcgtac 2960
Query: 901 tttcctttgagaactct 917
|||||||||||||||||
Sbjct: 2961 tttcctttgagaactct 2977
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6879
Number of Sequences: 1807
Number of extensions: 6879
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)